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<?php
/**
* ARC2 RDF Store LOAD Query Handler
*
* @author Benjamin Nowack
* @license <http://arc.semsol.org/license>
* @homepage <http://arc.semsol.org/>
* @package ARC2
*/
ARC2::inc('StoreQueryHandler');
class ARC2_StoreLoadQueryHandler extends ARC2_StoreQueryHandler {
function __construct($a, &$caller) {/* caller has to be a store */
parent::__construct($a, $caller);
}
function __init() {/* db_con, store_log_inserts */
parent::__init();
$this->store = $this->caller;
$this->write_buffer_size = $this->v('store_write_buffer', 2500, $this->a);
$this->split_threshold = $this->v('store_split_threshold', 0, $this->a);
$this->strip_mb_comp_str = $this->v('store_strip_mb_comp_str', 0, $this->a);
}
/* */
function runQuery($infos, $data = '', $keep_bnode_ids = 0) {
$url = $infos['query']['url'];
$graph = $infos['query']['target_graph'];
$this->target_graph = $graph ? $this->calcURI($graph) : $this->calcURI($url);
$this->fixed_target_graph = $graph ? $this->target_graph : '';
$this->keep_bnode_ids = $keep_bnode_ids;
/* reader */
ARC2::inc('Reader');
$reader = new ARC2_Reader($this->a, $this);
$reader->activate($url, $data);
/* format detection */
$mappings = array(
'rdfxml' => 'RDFXML',
'sparqlxml' => 'SPOG',
'turtle' => 'Turtle',
'ntriples' => 'Turtle',
'rss' => 'RSS',
'atom' => 'Atom',
'n3' => 'Turtle',
'html' => 'SemHTML',
'sgajson' => 'SGAJSON',
'cbjson' => 'CBJSON'
);
$format = $reader->getFormat();
if (!$format || !isset($mappings[$format])) {
return $this->addError('No loader available for "' .$url. '": ' . $format);
}
/* format loader */
$suffix = 'Store' . $mappings[$format] . 'Loader';
ARC2::inc($suffix);
$cls = 'ARC2_' . $suffix;
$loader = new $cls($this->a, $this);
$loader->setReader($reader);
/* lock */
if (!$this->store->getLock()) {
$l_name = $this->a['db_name'] . '.' . $this->store->getTablePrefix() . '.write_lock';
return $this->addError('Could not get lock in "runQuery" (' . $l_name . ')');
}
$this->has_lock = 1;
/* logging */
$this->t_count = 0;
$this->t_start = ARC2::mtime();
$this->log_inserts = $this->v('store_log_inserts', 0, $this->a);
if ($this->log_inserts) {
@unlink("arc_insert_log.txt");
$this->inserts = array();
$this->insert_times = array();
$this->t_prev = $this->t_start;
$this->t_count_prev = 0 ;
}
/* load and parse */
$this->max_term_id = $this->getMaxTermID();
$this->max_triple_id = $this->getMaxTripleID();
$this->column_type = $this->store->getColumnType();
//$this->createMergeTable();
$this->term_ids = array();
$this->triple_ids = array();
$this->sql_buffers = array();
$r = $loader->parse($url, $data);
/* done */
$this->checkSQLBuffers(1);
if ($this->log_inserts) {
$this->logInserts();
}
$this->store->releaseLock();
//$this->dropMergeTable();
if ((rand(1, 100) == 1)) $this->store->optimizeTables();
$t2 = ARC2::mtime();
$dur = round($t2 - $this->t_start, 4);
$r = array(
't_count' => $this->t_count,
'load_time' => $dur,
);
if ($this->log_inserts) {
$r['inserts'] = $this->inserts;
$r['insert_times'] = $this->insert_times;
}
return $r;
}
/* */
function addT($s, $p, $o, $s_type, $o_type, $o_dt = '', $o_lang = '') {
if (!$this->has_lock) return 0;
$type_ids = array ('uri' => '0', 'bnode' => '1' , 'literal' => '2');
$g = $this->getStoredTermID($this->target_graph, '0', 'id');
$s = (($s_type == 'bnode') && !$this->keep_bnode_ids) ? '_:b' . abs(crc32($g . $s)) . '_' . (strlen($s) > 12 ? substr(substr($s, 2) , -10) : substr($s, 2)) : $s;
$o = (($o_type == 'bnode') && !$this->keep_bnode_ids) ? '_:b' . abs(crc32($g . $o)) . '_' . (strlen($o) > 12 ? substr(substr($o, 2), -10) : substr($o, 2)) : $o;
/* triple */
$t = array(
's' => $this->getStoredTermID($s, $type_ids[$s_type], 's'),
'p' => $this->getStoredTermID($p, '0', 'id'),
'o' => $this->getStoredTermID($o, $type_ids[$o_type], 'o'),
'o_lang_dt' => $this->getStoredTermID($o_dt . $o_lang, $o_dt ? '0' : '2', 'id'),
'o_comp' => $this->getOComp($o),
's_type' => $type_ids[$s_type],
'o_type' => $type_ids[$o_type],
);
$t['t'] = $this->getTripleID($t);
if (is_array($t['t'])) {/* t exists already */
$t['t'] = $t['t'][0];
}
else {
$this->bufferTripleSQL($t);
}
/* g2t */
$g2t = array('g' => $g, 't' => $t['t']);
$this->bufferGraphSQL($g2t);
$this->t_count++;
/* check buffers */
if (($this->t_count % $this->write_buffer_size) == 0) {
$force_write = 1;
$reset_buffers = (($this->t_count % ($this->write_buffer_size * 2)) == 0);
$refresh_lock = (($this->t_count % 25000) == 0);
$split_tables = (($this->t_count % ($this->write_buffer_size * 10)) == 0);
if ($this->log_inserts) $this->logInserts();
$this->checkSQLBuffers($force_write, $reset_buffers, $refresh_lock, $split_tables);
}
}
/* */
function getMaxTermID() {
$con = $this->store->getDBCon();
$sql = '';
foreach (array('id2val', 's2val', 'o2val') as $tbl) {
$sql .= $sql ? ' UNION ' : '';
$sql .= "(SELECT MAX(id) as `id` FROM " . $this->store->getTablePrefix() . $tbl . ')';
}
$r = 0;
if (($rs = $this->queryDB($sql, $con)) && mysql_num_rows($rs)) {
while ($row = mysql_fetch_array($rs)) {
$r = ($r < $row['id']) ? $row['id'] : $r;
}
}
return $r + 1;
}
function getMaxTripleID() {
$con = $this->store->getDBCon();
$sql = "SELECT MAX(t) AS `id` FROM " . $this->store->getTablePrefix() . "triple";
if (($rs = $this->queryDB($sql, $con)) && mysql_num_rows($rs) && ($row = mysql_fetch_array($rs))) {
return $row['id'] + 1;
}
return 1;
}
function getStoredTermID($val, $type_id, $tbl) {
$con = $this->store->getDBCon();
/* buffered */
if (isset($this->term_ids[$val])) {
if (!isset($this->term_ids[$val][$tbl])) {
foreach (array('id', 's', 'o') as $other_tbl) {
if (isset($this->term_ids[$val][$other_tbl])) {
$this->term_ids[$val][$tbl] = $this->term_ids[$val][$other_tbl];
$this->bufferIDSQL($tbl, $this->term_ids[$val][$tbl], $val, $type_id);
break;
}
}
}
return $this->term_ids[$val][$tbl];
}
/* db */
$tbl_prefix = $this->store->getTablePrefix();
$sub_tbls = ($tbl == 'id') ? array('id2val', 's2val', 'o2val') : ($tbl == 's' ? array('s2val', 'id2val', 'o2val') : array('o2val', 'id2val', 's2val'));
foreach ($sub_tbls as $sub_tbl) {
$id = 0;
//$sql = "SELECT id AS `id`, '" . $sub_tbl . "' AS `tbl` FROM " . $tbl_prefix . $sub_tbl . " WHERE val = BINARY '" . mysql_real_escape_string($val, $con) . "'";
/* via hash */
if (preg_match('/^(s2val|o2val)$/', $sub_tbl) && $this->hasHashColumn($sub_tbl)) {
$sql = "SELECT id AS `id`, val AS `val` FROM " . $tbl_prefix . $sub_tbl . " WHERE val_hash = BINARY '" . $this->getValueHash($val) . "'";
if (($rs = $this->queryDB($sql, $con)) && mysql_num_rows($rs)) {
while ($row = mysql_fetch_array($rs)) {
if ($row['val'] == $val) {
$id = $row['id'];
break;
}
}
}
}
else {
$sql = "SELECT id AS `id` FROM " . $tbl_prefix . $sub_tbl . " WHERE val = BINARY '" . mysql_real_escape_string($val, $con) . "'";
if (($rs = $this->queryDB($sql . ' LIMIT 1', $con)) && mysql_num_rows($rs)) {
$row = mysql_fetch_array($rs);
$id = $row['id'];
}
}
if ($id) {
$this->term_ids[$val] = array($tbl => $id);
if ($sub_tbl != $tbl . '2val') {
$this->bufferIDSQL($tbl, $id, $val, $type_id);
}
break;
}
}
/* new */
if (!isset($this->term_ids[$val])) {
$this->term_ids[$val] = array($tbl => $this->max_term_id);
$this->bufferIDSQL($tbl, $this->max_term_id, $val, $type_id);
$this->max_term_id++;
/* upgrade tables ? */
if (($this->column_type == 'mediumint') && ($this->max_term_id >= 16750000)) {
$this->store->extendColumns();
$this->column_type = 'int';
}
}
return $this->term_ids[$val][$tbl];
}
function getTripleID($t) {
$con = $this->store->getDBCon();
$val = serialize($t);
/* buffered */
if (isset($this->triple_ids[$val])) {
return array($this->triple_ids[$val]);/* hack for "don't insert this triple" */
}
/* db */
$sql = "SELECT t FROM " . $this->store->getTablePrefix() . "triple WHERE
s = " . $t['s'] . " AND p = " . $t['p'] . " AND o = " . $t['o'] . " AND o_lang_dt = " . $t['o_lang_dt'] . " AND s_type = " . $t['s_type'] . " AND o_type = " . $t['o_type'] . "
LIMIT 1
";
if (($rs = $this->queryDB($sql, $con)) && mysql_num_rows($rs) && ($row = mysql_fetch_array($rs))) {
$this->triple_ids[$val] = $row['t'];/* hack for "don't insert this triple" */
return array($row['t']);/* hack for "don't insert this triple" */
}
/* new */
else {
$this->triple_ids[$val] = $this->max_triple_id;
$this->max_triple_id++;
/* split tables ? */
if (0 && $this->split_threshold && !($this->max_triple_id % $this->split_threshold)) {
$this->store->splitTables();
$this->dropMergeTable();
$this->createMergeTable();
}
/* upgrade tables ? // Thanks to patch by Mark Fichtner (https://github.com/Knurg) */
if (($this->column_type == 'mediumint') && ($this->max_triple_id >= 16750000)) {
$this->store->extendColumns();
$this->column_type = 'int';
}
return $this->triple_ids[$val];
}
}
function getOComp($val) {
/* try date (e.g. 21 August 2007) */
if (preg_match('/^[0-9]{1,2}\s+[a-z]+\s+[0-9]{4}/i', $val) && ($uts = strtotime($val)) && ($uts !== -1)) {
return date("Y-m-d\TH:i:s", $uts);
}
/* xsd date (e.g. 2009-05-28T18:03:38+09:00 2009-05-28T18:03:38GMT) */
if (preg_match('/^([0-9]{4}\-[0-9]{2}\-[0-9]{2}\T)([0-9\:]+)?([0-9\+\-\:\Z]+)?(\s*[a-z]{2,3})?$/si', $val, $m)) {
/* yyyy-mm-dd */
$val = $m[1];
/* hh:ss */
if ($m[2]) {
$val .= $m[2];
/* timezone offset */
if (isset($m[3]) && ($m[3] != 'Z')) {
$uts = strtotime(str_replace('T', ' ', $val));
if (preg_match('/([\+\-])([0-9]{2})\:?([0-9]{2})$/', $m[3], $sub_m)) {
$diff_mins = (3600 * ltrim($sub_m[2], '0')) + ltrim($sub_m[3], '0');
$uts = ($sub_m[1] == '-') ? $uts + $diff_mins : $uts - $diff_mins;
$val = date('Y-m-d\TH:i:s\Z', $uts);
}
}
else {
$val .= 'Z';
}
}
return $val;
}
/* fallback & backup w/o UTC calculation, to be removed in later revision */
if (preg_match('/^[0-9]{4}[0-9\-\:\T\Z\+]+([a-z]{2,3})?$/i', $val)) {
return $val;
}
if (is_numeric($val)) {
$val = sprintf("%f", $val);
if (preg_match("/([\-\+])([0-9]*)\.([0-9]*)/", $val, $m)) {
return $m[1] . sprintf("%018s", $m[2]) . "." . sprintf("%-015s", $m[3]);
}
if (preg_match("/([0-9]*)\.([0-9]*)/", $val, $m)) {
return "+" . sprintf("%018s", $m[1]) . "." . sprintf("%-015s", $m[2]);
}
return $val;
}
/* any other string: remove tags, linebreaks etc., but keep MB-chars */
//$val = substr(trim(preg_replace('/[\W\s]+/is', '-', strip_tags($val))), 0, 35);
// [\PL\s]+ ( = non-Letters) kills digits
$re = $this->has_pcre_unicode ? '/[\PL\s]+/isu' : '/[\s\'\"\´\`]+/is';
$re = '/[\s\'\"\´\`]+/is';
$val = trim(preg_replace($re, '-', strip_tags($val)));
if (strlen($val) > 35) {
$fnc = function_exists("mb_substr") ? 'mb_substr' : 'substr';
$val = $fnc($val, 0, 17) . '-' . $fnc($val, -17);
}
if ($this->strip_mb_comp_str) {
$val = urldecode(preg_replace('/\%[0-9A-F]{2}/', '', urlencode($val)));
}
return $this->toUTF8($val);
}
/* */
function bufferTripleSQL($t) {
$con = $this->store->getDBCon();
$tbl = 'triple';
$sql = ", ";
if (!isset($this->sql_buffers[$tbl])) {
$this->sql_buffers[$tbl] = "INSERT IGNORE INTO " . $this->store->getTablePrefix() . $tbl . " (t, s, p, o, o_lang_dt, o_comp, s_type, o_type) VALUES";
$sql = " ";
}
$this->sql_buffers[$tbl] .= $sql . "(" . $t['t'] . ", " . $t['s'] . ", " . $t['p'] . ", " . $t['o'] . ", " . $t['o_lang_dt'] . ", '" . mysql_real_escape_string($t['o_comp'], $con) . "', " . $t['s_type'] . ", " . $t['o_type'] . ")";
}
function bufferGraphSQL($g2t) {
$tbl = 'g2t';
$sql = ", ";
if (!isset($this->sql_buffers[$tbl])) {
$this->sql_buffers[$tbl] = "INSERT IGNORE INTO " . $this->store->getTablePrefix() . $tbl . " (g, t) VALUES";
$sql = " ";
}
$this->sql_buffers[$tbl] .= $sql . "(" . $g2t['g'] . ", " . $g2t['t'] . ")";
}
function bufferIDSQL($tbl, $id, $val, $val_type) {
$con = $this->store->getDBCon();
$tbl = $tbl . '2val';
if ($tbl == 'id2val') {
$cols = "id, val, val_type";
$vals = "(" . $id . ", '" . mysql_real_escape_string($val, $con) . "', " . $val_type . ")";
}
elseif (preg_match('/^(s2val|o2val)$/', $tbl) && $this->hasHashColumn($tbl)) {
$cols = "id, val_hash, val";
$vals = "(" . $id . ", '" . $this->getValueHash($val). "', '" . mysql_real_escape_string($val, $con) . "')";
}
else {
$cols = "id, val";
$vals = "(" . $id . ", '" . mysql_real_escape_string($val, $con) . "')";
}
if (!isset($this->sql_buffers[$tbl])) {
$this->sql_buffers[$tbl] = '';
$sql = "INSERT IGNORE INTO " . $this->store->getTablePrefix() . $tbl . "(" . $cols . ") VALUES ";
}
else {
$sql = ", ";
}
$sql .= $vals;
$this->sql_buffers[$tbl] .= $sql;
}
/* */
function checkSQLBuffers($force_write = 0, $reset_id_buffers = 0, $refresh_lock = 0, $split_tables = 0) {
$con = $this->store->getDBCon();
if (!$this->keep_time_limit) @set_time_limit($this->v('time_limit', 60, $this->a));
foreach (array('triple', 'g2t', 'id2val', 's2val', 'o2val') as $tbl) {
$buffer_size = isset($this->sql_buffers[$tbl]) ? 1 : 0;
if ($buffer_size && $force_write) {
$t1 = ARC2::mtime();
$this->queryDB($this->sql_buffers[$tbl], $con);
/* table error */
if ($er = mysql_error($con)) {
$this->autoRepairTable($er, $con, $this->sql_buffers[$tbl]);
}
unset($this->sql_buffers[$tbl]);
if ($this->log_inserts) {
$t2 = ARC2::mtime();
$this->inserts[$tbl] = $this->v($tbl, 0, $this->inserts) + max(0, mysql_affected_rows($con));
$dur = round($t2 - $t1, 4);
$this->insert_times[$tbl] = isset($this->insert_times[$tbl]) ? $this->insert_times[$tbl] : array('min' => $dur, 'max' => $dur, 'sum' => $dur);
$this->insert_times[$tbl] = array('min' => min($dur, $this->insert_times[$tbl]['min']), 'max' => max($dur, $this->insert_times[$tbl]['max']), 'sum' => $dur + $this->insert_times[$tbl]['sum']);
}
/* reset term id buffers */
if ($reset_id_buffers) {
$this->term_ids = array();
$this->triple_ids = array();
}
/* refresh lock */
if ($refresh_lock) {
$this->store->releaseLock();
$this->has_lock = 0;
sleep(1);
if (!$this->store->getLock(5)) return $this->addError('Could not re-obtain lock in "checkSQLBuffers"');
$this->has_lock = 1;
}
}
}
return 1;
}
function autoRepairTable($er, $con, $sql = '') {
$this->addError('MySQL error: ' . $er . ' (' . $sql . ')');
if (preg_match('/Table \'[^\']+\/([a-z0-9\_\-]+)\' .*(crashed|repair)/i', $er, $m)) {
$rs = $this->queryDB('REPAIR TABLE ' . rawurlencode($m[1]), $con);
$msg = $rs ? mysql_fetch_array($rs) : array();
if ($this->v('Msg_type', 'error', $msg) == 'error') {
/* auto-reset */
if ($this->v('store_reset_on_table_crash', 0, $this->a)) {
$this->store->drop();
$this->store->setUp();
}
else {
$er = $this->v('Msg_text', 'unknown error', $msg);
$this->addError('Auto-repair failed on ' . rawurlencode($m[1]) . ': ' . $er);
}
//die("Fatal errors: \n" . print_r($this->getErrors(), 1));
}
}
}
/* speed log */
function logInserts() {
$t_start = $this->t_start;
$t_prev = $this->t_prev;
$t_now = ARC2::mtime();
$tc_prev = $this->t_count_prev;
$tc_now = $this->t_count;
$tc_diff = $tc_now - $tc_prev;
$dur_full = $t_now - $t_start;
$dur_diff = $t_now - $t_prev;
$speed_full = round($tc_now / $dur_full);
$speed_now = round($tc_diff / $dur_diff);
$r = $tc_diff . ' in ' . round($dur_diff, 5) . ' = ' . $speed_now . ' t/s (' .$tc_now. ' in ' . round($dur_full, 5). ' = ' . $speed_full . ' t/s )';
$fp = @fopen("arc_insert_log.txt", "a");
@fwrite($fp, $r . "\r\n");
@fclose($fp);
$this->t_prev = $t_now;
$this->t_count_prev = $tc_now;
}
}